Datasets:

songlab
/

celegans_lethal

chrom stringclasses 6 values	pos int64 6.28k 20.9M	ref stringclasses 4 values	alt stringclasses 4 values	consequence stringclasses 3 values	label bool 2 classes	__index_level_0__ int64 0 22.2k
III	7,359,885	G	A	nonsense	true	0
III	7,360,261	C	T	missense	true	1
III	8,169,268	G	A	nonsense	true	2
III	8,166,973	G	A	nonsense	true	3
III	4,943,615	C	T	missense	true	4
III	4,943,991	C	T	nonsense	true	5
III	5,556,761	G	A	missense	true	6
III	4,337,800	G	A	missense	true	7
III	6,461,537	G	A	nonsense	true	8
III	6,461,808	G	A	missense	true	9
III	5,226,777	G	A	splice donor/acceptor	true	10
III	7,638,442	G	A	missense	true	11
III	7,626,858	G	A	missense	true	12
III	7,022,627	G	A	missense	true	13
III	6,207,832	C	T	nonsense	true	14
III	4,705,658	G	A	missense	true	15
III	5,260,831	G	A	missense	true	16
III	5,725,120	T	A	nonsense	true	17
III	4,936,540	G	A	nonsense	true	18
III	4,936,112	G	A	nonsense	true	19
III	5,229,181	G	A	missense	true	20
V	1,263,600	C	T	nonsense	true	21
V	1,263,843	G	A	missense	true	22
V	7,243,996	G	A	nonsense	true	23
V	7,245,765	G	A	missense	true	24
V	7,856,077	A	T	nonsense	true	25
V	7,856,451	G	A	missense	true	26
V	4,632,154	G	A	missense	true	27
V	4,631,873	C	T	missense	true	28
V	7,179,311	G	A	missense	true	29
V	7,180,252	C	T	nonsense	true	30
V	7,208,502	G	A	nonsense	true	31
V	7,209,026	G	A	nonsense	true	32
V	4,441,757	G	A	missense	true	33
V	4,439,195	C	T	nonsense	true	34
V	6,435,516	G	A	missense	true	35
V	6,434,336	C	T	missense	true	36
V	6,708,760	C	T	splice donor/acceptor	true	37
V	6,707,665	G	A	missense	true	38
V	4,826,120	G	A	missense	true	39
V	4,825,181	A	T	missense	true	40
V	5,051,195	C	T	nonsense	true	41
V	5,051,774	C	T	nonsense	true	42
V	8,033,082	C	T	nonsense	true	43
V	8,033,150	G	A	nonsense	true	44
V	4,691,491	C	T	nonsense	true	45
V	4,691,043	G	A	missense	true	46
V	5,940,676	G	A	nonsense	true	47
V	5,940,035	G	A	missense	true	48
V	5,940,509	C	T	nonsense	true	49
V	5,306,632	G	A	splice donor/acceptor	true	50
V	5,306,878	G	A	missense	true	51
V	7,232,261	A	T	nonsense	true	52
V	7,231,630	G	A	nonsense	true	53
V	4,184,746	C	T	nonsense	true	54
V	4,184,551	C	T	nonsense	true	55
V	5,684,545	C	T	missense	true	56
V	5,684,347	G	A	missense	true	57
V	7,806,113	G	A	nonsense	true	58
V	7,806,685	C	T	nonsense	true	59
V	8,540,346	G	A	missense	true	60
V	8,541,157	G	A	missense	true	61
V	8,546,796	G	A	missense	true	62
V	4,715,842	C	T	missense	true	63
V	1,986,588	G	A	nonsense	true	64
V	5,317,187	C	T	missense	true	65
V	4,829,444	G	A	splice donor/acceptor	true	66
V	4,821,165	G	A	missense	true	67
V	4,346,291	C	T	splice donor/acceptor	true	68
V	9,516,186	G	A	splice donor/acceptor	true	69
V	8,132,990	G	A	nonsense	true	70
V	7,832,305	C	T	nonsense	true	71
I	6,313	G	T	nonsense	false	0
I	6,314	T	G	missense	false	1
I	18,032	T	C	missense	false	2
I	26,449	A	T	missense	false	3
I	44,309	A	G	missense	false	4
I	44,393	A	G	missense	false	5
I	54,127	T	A	missense	false	6
I	54,251	T	G	missense	false	7
I	55,927	G	A	missense	false	8
I	56,678	A	G	missense	false	9
I	56,976	A	G	missense	false	10
I	57,467	A	C	missense	false	11
I	59,600	T	C	missense	false	12
I	90,474	C	A	missense	false	13
I	92,616	G	T	missense	false	14
I	107,528	A	G	missense	false	15
I	108,121	T	A	missense	false	16
I	114,263	A	G	missense	false	17
I	120,615	C	G	missense	false	18
I	132,320	C	T	missense	false	19
I	136,310	G	A	missense	false	20
I	136,684	G	C	missense	false	21
I	142,075	G	C	missense	false	22
I	150,985	C	T	missense	false	23
I	175,036	A	G	missense	false	24
I	175,779	G	C	missense	false	25
I	189,916	T	C	missense	false	26
I	192,950	C	G	missense	false	27

End of preview. Expand in Data Studio

C. elegans lethal variants

Predictions from all models

Downloads last month: 19

Size of downloaded dataset files:

295 kB

Size of the auto-converted Parquet files:

295 kB

Number of rows:

22,255

Collection including songlab/celegans_lethal

GPN-Star

Collection

paper: https://www.biorxiv.org/content/10.1101/2025.09.21.677619v1 code: https://github.com/songlab-cal/gpn • 30 items • Updated Dec 7, 2025 • 7