update inference, inference web UI with gradio

app/demo/demo.py

@@ -0,0 +1,42 @@
+import sys
+import gradio as gr
+from pathlib import Path
+
+# Adds root directory to sys.path
+ROOT_DIR = Path(__file__).resolve().parent.parent.parent
+sys.path.append(str(ROOT_DIR))
+
+from app.utils.inference_utils import load_model, predict
+
+# Initial default values
+DEFAULT_MODE = "multimodal"
+MODEL_PATHS = {
+    "text": "medi_llm_state_dict_text.pth",
+    "image": "medi_llm_state_dict_image.pth",
+    "multimodal": "medi_llm_state_dict_multimodal.pth"
+}
+
+model_cache = {}
+
+
+def classify(mode, emr_text, image):
+    if mode not in model_cache:
+        model_cache[mode] = load_model(mode, MODEL_PATHS[mode])
+    model = model_cache[mode]
+    return predict(model, mode, emr_text=emr_text, image=image)
+
+
+demo = gr.Interface(
+    fn=classify,
+    inputs=[
+        gr.Radio(choices=["text", "image", "multimodal"], value=DEFAULT_MODE, label="Select Mode"),
+        gr.Textbox(lines=6, label="EMR Text"),
+        gr.Image(type="pil", label="Chest X-ray")
+    ],
+    outputs=gr.Text(label="Predicted Triage Level"),
+    title="🩺 Medi-LLM: Multimodal Clinical Triage Assistant 🩻",
+    description="Select a mode and input either EMR text, X-ray image, or both to get triage predictions."
+)
+
+if __name__ == "__main__":
+    demo.launch()

app/utils/inference_utils.py

@@ -0,0 +1,64 @@
+import sys
+import torch
+import yaml
+from pathlib import Path
+from transformers import AutoTokenizer
+from torchvision import transforms
+
+ROOT_DIR = Path(__file__).resolve().parent.parent.parent
+sys.path.append(str(ROOT_DIR))
+
+from src.multimodal_model import MediLLMModel
+
+DEVICE = torch.device("cuda" if torch.cuda.is_available() else "cpu")
+
+# Label map
+inv_map = {0: "low", 1: "medium", 2: "high"}
+
+# Tokenizer and image transform
+tokenizer = AutoTokenizer.from_pretrained("emilyalsentzer/Bio_ClinicalBERT")
+image_transform = transforms.Compose([
+    transforms.Resize((256, 256)),
+    transforms.CenterCrop(224),
+    transforms.ToTensor()
+])
+
+
+def load_model(mode, model_path, config_path=str(Path("config/config.yaml").resolve())):
+    with open(config_path, "r") as f:
+        config = yaml.safe_load(f)[mode]
+
+    model = MediLLMModel(
+        mode=mode,
+        dropout=config["dropout"],
+        hidden_dim=config["hidden_dim"]
+    )
+    model.load_state_dict(torch.load(model_path, map_location=DEVICE))
+    model.to(DEVICE)
+    model.eval()
+    return model
+
+
+def predict(model, mode, emr_text=None, image=None):
+    with torch.no_grad():
+        input_ids = attention_mask = img_tensor = None
+
+        if mode in ["text", "multimodal"] and emr_text:
+            text_tokens = tokenizer(
+                emr_text,
+                return_tensors="pt",
+                truncation=True,
+                padding="max_length",
+                max_length=128,
+            )
+            input_ids = text_tokens["input_ids"].to(DEVICE)
+            attention_mask = text_tokens["attention_mask"].to(DEVICE)
+
+        if mode in ["image", "multimodal"] and image:
+            img_tensor = image_transform(image).unsqueeze(0).to(DEVICE)
+
+        output = model(input_ids=input_ids, attention_mask=attention_mask, image=img_tensor)
+        pred = torch.argmax(output, dim=1).item()
+        confidence = torch.softmax(output, dim=1).squeeze()[pred].item()
+
+        return f"{inv_map[pred]} (Confidence: {confidence:.2f})"

inference.py

@@ -7,6 +7,7 @@ from sklearn.metrics import accuracy_score, f1_score, classification_report
 from pathlib import Path
 from tqdm import tqdm
 from datetime import datetime
+from torchvision import transforms
 
 from src.triage_dataset import TriageDataset
 from src.multimodal_model import MediLLMModel
@@ -14,6 +15,12 @@ from src.multimodal_model import MediLLMModel
 
 DEVICE = torch.device("cuda" if torch.cuda.is_available() else "cpu")
 
+inference_transform = transforms.Compose([
+    transforms.Resize((256, 256)),
+    transforms.CenterCrop(224),
+    transforms.ToTensor()
+])
+
 
 def load_config(config_path="config/config.yaml", mode="multimodal"):
     with open(config_path) as f:
@@ -104,8 +111,10 @@ def main():
     dataset = TriageDataset(
         csv_file=args.csv_path,
         mode=args.mode,
-        image_base_dir=args.image_dir
+        image_base_dir=args.image_dir,
+        transform=inference_transform  # avoid random augmentations during inference
     )
+
     dataloader = DataLoader(dataset, batch_size=batch_size, shuffle=False)
 
     model = MediLLMModel(

predictions_image_20250725_201612.csv → predictions_image_20250726_174100.csv

@@ -1,7 +1,7 @@
 patient_id,predicted,truth_label,emr_text,image_path
 COVID-8,high,high,"Patient TEST-DC29, a 55 years old individual presented after experiencing symptoms for approximately 10 days. Patient remains oriented with stable hemodynamics. A gradual onset of dry cough with mild respiratory discomfort has been documented. Vital measurements include a body temperature of 100.8°F and an oxygen saturation level of 87%. No definitive pattern observed; further evaluation is warranted. No remarkable family history or chronic illness reported. Anosmia has been intermittently observed over recent days.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1640.png
 NORMAL-6,low,low,"Patient TEST-RF26, a 42 years old individual presented after experiencing symptoms for approximately 6 days. A gradual onset of dry cough with mild respiratory discomfort has been documented. Standard precautions have been advised post-evaluation. Vital measurements include a body temperature of 98.6°F and an oxygen saturation level of 98%. No prior admissions or surgical history disclosed. Diagnosis remains unclear pending further laboratory confirmation.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-2223.png
-VIRAL PNEUMONIA-5,high,medium,"Patient TEST-NP02, a 75 years old individual presented after experiencing symptoms for approximately 9 days. The patient has noted intermittent chest pressure and occasional shortness of breath. Vital measurements include a body temperature of 99.1°F and an oxygen saturation level of 92%. No definitive pattern observed; further evaluation is warranted. Patient remains oriented with stable hemodynamics. Radiographic evidence reveals dispersed infiltrative patterns.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-1101.png
+VIRAL PNEUMONIA-5,medium,medium,"Patient TEST-NP02, a 75 years old individual presented after experiencing symptoms for approximately 9 days. The patient has noted intermittent chest pressure and occasional shortness of breath. Vital measurements include a body temperature of 99.1°F and an oxygen saturation level of 92%. No definitive pattern observed; further evaluation is warranted. Patient remains oriented with stable hemodynamics. Radiographic evidence reveals dispersed infiltrative patterns.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-1101.png
 NORMAL-2,low,low,"Patient TEST-AJ06, a 50 years old individual presented after experiencing symptoms for approximately 4 days. Episodes of throat irritation and general malaise observed. Vital measurements include a body temperature of 97.9°F and an oxygen saturation level of 95%. Diagnosis remains unclear pending further laboratory confirmation. No prior admissions or surgical history disclosed.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-7819.png
 COVID-10,high,high,"Patient TEST-DF19, a 68 years old individual presented after experiencing symptoms for approximately 7 days. The patient has noted intermittent chest pressure and occasional shortness of breath. Vital measurements include a body temperature of 102.4°F and an oxygen saturation level of 92%. No prior admissions or surgical history disclosed. No definitive pattern observed; further evaluation is warranted.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-418.png
 COVID-5,high,high,"Patient TEST-RI51, a 46 years old individual presented after experiencing symptoms for approximately 6 days. Nutritional intake and sleep patterns appear adequate. Episodes of throat irritation and general malaise observed. Vital measurements include a body temperature of 99.4°F and an oxygen saturation level of 89%. No remarkable family history or chronic illness reported. Diagnosis remains unclear pending further laboratory confirmation.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-653.png
@@ -13,19 +13,19 @@ COVID-7,high,high,"Patient TEST-DN15, a 37 years old individual presented after
 NORMAL-7,low,low,"Patient TEST-QU92, a 85 years old individual presented after experiencing symptoms for approximately 3 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 98.2°F and an oxygen saturation level of 97%. Nutritional intake and sleep patterns appear adequate. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-7874.png
 COVID-6,high,high,"Patient TEST-YM73, a 65 years old individual presented after experiencing symptoms for approximately 2 days. Episodes of throat irritation and general malaise observed. Nutritional intake and sleep patterns appear adequate. No remarkable family history or chronic illness reported. Vital measurements include a body temperature of 100.0°F and an oxygen saturation level of 93%. Diagnosis remains unclear pending further laboratory confirmation. Anosmia has been intermittently observed over recent days.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1399.png
 NORMAL-1,low,low,"Patient TEST-HN49, a 34 years old individual presented after experiencing symptoms for approximately 9 days. A gradual onset of dry cough with mild respiratory discomfort has been documented. Vital measurements include a body temperature of 98.4°F and an oxygen saturation level of 99%. No prior admissions or surgical history disclosed. No prior admissions or surgical history disclosed. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-1925.png
-NORMAL-4,high,low,"Patient TEST-QE09, a 52 years old individual presented after experiencing symptoms for approximately 7 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 98.2°F and an oxygen saturation level of 95%. Preliminary indicators fall into a diagnostic grey area. There are currently no active complaints from the patient.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-3320.png
+NORMAL-4,low,low,"Patient TEST-QE09, a 52 years old individual presented after experiencing symptoms for approximately 7 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 98.2°F and an oxygen saturation level of 95%. Preliminary indicators fall into a diagnostic grey area. There are currently no active complaints from the patient.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-3320.png
 VIRAL PNEUMONIA-1,medium,medium,"Patient TEST-HR49, a 61 years old individual presented after experiencing symptoms for approximately 5 days. No remarkable family history or chronic illness reported. Patient remains oriented with stable hemodynamics. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 99.5°F and an oxygen saturation level of 90%. Preliminary indicators fall into a diagnostic grey area. Radiographic evidence reveals dispersed infiltrative patterns.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-144.png
-NORMAL-8,low,low,"Patient TEST-RW12, a 54 years old individual presented after experiencing symptoms for approximately 5 days. A gradual onset of dry cough with mild respiratory discomfort has been documented. Vital measurements include a body temperature of 98.4°F and an oxygen saturation level of 96%. Presentation overlaps multiple pulmonary conditions. Nutritional intake and sleep patterns appear adequate.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-4447.png
+NORMAL-8,medium,low,"Patient TEST-RW12, a 54 years old individual presented after experiencing symptoms for approximately 5 days. A gradual onset of dry cough with mild respiratory discomfort has been documented. Vital measurements include a body temperature of 98.4°F and an oxygen saturation level of 96%. Presentation overlaps multiple pulmonary conditions. Nutritional intake and sleep patterns appear adequate.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-4447.png
 VIRAL PNEUMONIA-9,medium,medium,"Patient TEST-ZO32, a 20 years old individual presented after experiencing symptoms for approximately 10 days. Standard precautions have been advised post-evaluation. No remarkable family history or chronic illness reported. A gradual onset of dry cough with mild respiratory discomfort has been documented. Vital measurements include a body temperature of 101.2°F and an oxygen saturation level of 92%. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-261.png
 VIRAL PNEUMONIA-10,medium,medium,"Patient TEST-CU46, a 40 years old individual presented after experiencing symptoms for approximately 8 days. No prior admissions or surgical history disclosed. A gradual onset of dry cough with mild respiratory discomfort has been documented. No remarkable family history or chronic illness reported. Vital measurements include a body temperature of 99.1°F and an oxygen saturation level of 95%. Diagnosis remains unclear pending further laboratory confirmation.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-166.png
 COVID-1,high,high,"Patient TEST-FB14, a 40 years old individual presented after experiencing symptoms for approximately 7 days. Nutritional intake and sleep patterns appear adequate. The patient has noted intermittent chest pressure and occasional shortness of breath. Nutritional intake and sleep patterns appear adequate. Vital measurements include a body temperature of 98.9°F and an oxygen saturation level of 91%. Presentation overlaps multiple pulmonary conditions.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-3380.png
 COVID-2,high,high,"Patient TEST-HB66, a 73 years old individual presented after experiencing symptoms for approximately 10 days. Mild respiratory symptoms have progressed over several days. Nutritional intake and sleep patterns appear adequate. Vital measurements include a body temperature of 99.3°F and an oxygen saturation level of 89%. Diagnosis remains unclear pending further laboratory confirmation.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1410.png
-NORMAL-3,high,low,"Patient TEST-KX40, a 39 years old individual presented after experiencing symptoms for approximately 2 days. Reported complaints include mild fatigue and sporadic episodes of wheezing. No prior admissions or surgical history disclosed. No prior admissions or surgical history disclosed. Vital measurements include a body temperature of 97.6°F and an oxygen saturation level of 95%. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-5988.png
+NORMAL-3,low,low,"Patient TEST-KX40, a 39 years old individual presented after experiencing symptoms for approximately 2 days. Reported complaints include mild fatigue and sporadic episodes of wheezing. No prior admissions or surgical history disclosed. No prior admissions or surgical history disclosed. Vital measurements include a body temperature of 97.6°F and an oxygen saturation level of 95%. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-5988.png
 COVID-9,low,high,"Patient TEST-JK08, a 64 years old individual presented after experiencing symptoms for approximately 7 days. Nutritional intake and sleep patterns appear adequate. Episodes of throat irritation and general malaise observed. Vital measurements include a body temperature of 100.0°F and an oxygen saturation level of 93%. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-2796.png
 VIRAL PNEUMONIA-3,medium,medium,"Patient TEST-RZ58, a 84 years old individual presented after experiencing symptoms for approximately 4 days. Reported complaints include mild fatigue and sporadic episodes of wheezing. Vital measurements include a body temperature of 100.3°F and an oxygen saturation level of 91%. No remarkable family history or chronic illness reported. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-843.png
 NORMAL-9,low,low,"Patient TEST-SG97, a 24 years old individual presented after experiencing symptoms for approximately 10 days. Standard precautions have been advised post-evaluation. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 98.7°F and an oxygen saturation level of 100%. Presentation overlaps multiple pulmonary conditions.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-4888.png
 VIRAL PNEUMONIA-2,medium,medium,"Patient TEST-OG12, a 74 years old individual presented after experiencing symptoms for approximately 3 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 101.3°F and an oxygen saturation level of 91%. Presentation overlaps multiple pulmonary conditions. No prior admissions or surgical history disclosed.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-396.png
 COVID-4,high,high,"Patient TEST-KY96, a 83 years old individual presented after experiencing symptoms for approximately 6 days. Patient remains oriented with stable hemodynamics. Reported complaints include mild fatigue and sporadic episodes of wheezing. Vital measurements include a body temperature of 99.9°F and an oxygen saturation level of 94%. Presentation overlaps multiple pulmonary conditions. Nutritional intake and sleep patterns appear adequate.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1639.png
 VIRAL PNEUMONIA-7,medium,medium,"Patient TEST-ZK84, a 52 years old individual presented after experiencing symptoms for approximately 1 days. Patient remains oriented with stable hemodynamics. Episodes of throat irritation and general malaise observed. No remarkable family history or chronic illness reported. Vital measurements include a body temperature of 99.7°F and an oxygen saturation level of 91%. Clinical features are suggestive of a nonspecific viral etiology.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-397.png
-NORMAL-10,high,low,"Patient TEST-PW53, a 51 years old individual presented after experiencing symptoms for approximately 9 days. Standard precautions have been advised post-evaluation. The patient has noted intermittent chest pressure and occasional shortness of breath. Vital measurements include a body temperature of 97.6°F and an oxygen saturation level of 97%. Diagnosis remains unclear pending further laboratory confirmation. No prior admissions or surgical history disclosed.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-1943.png
+NORMAL-10,low,low,"Patient TEST-PW53, a 51 years old individual presented after experiencing symptoms for approximately 9 days. Standard precautions have been advised post-evaluation. The patient has noted intermittent chest pressure and occasional shortness of breath. Vital measurements include a body temperature of 97.6°F and an oxygen saturation level of 97%. Diagnosis remains unclear pending further laboratory confirmation. No prior admissions or surgical history disclosed.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-1943.png
 VIRAL PNEUMONIA-4,medium,medium,"Patient TEST-PP31, a 38 years old individual presented after experiencing symptoms for approximately 3 days. Episodes of throat irritation and general malaise observed. Vital measurements include a body temperature of 102.1°F and an oxygen saturation level of 91%. Presentation overlaps multiple pulmonary conditions. Patient remains oriented with stable hemodynamics. Radiographic evidence reveals dispersed infiltrative patterns.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-411.png

predictions_multimodal_20250725_201743.csv → predictions_multimodal_20250726_174151.csv

@@ -8,7 +8,7 @@ COVID-5,high,high,"Patient TEST-RI51, a 46 years old individual presented after
 VIRAL PNEUMONIA-8,medium,medium,"Patient TEST-CD95, a 64 years old individual presented after experiencing symptoms for approximately 8 days. Episodes of throat irritation and general malaise observed. Nutritional intake and sleep patterns appear adequate. Vital measurements include a body temperature of 100.9°F and an oxygen saturation level of 96%. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-1286.png
 COVID-3,high,high,"Patient TEST-KO00, a 56 years old individual presented after experiencing symptoms for approximately 3 days. No prior admissions or surgical history disclosed. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 100.2°F and an oxygen saturation level of 89%. No prior admissions or surgical history disclosed. No definitive pattern observed; further evaluation is warranted.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-2258.png
 NORMAL-5,low,low,"Patient TEST-EK85, a 79 years old individual presented after experiencing symptoms for approximately 5 days. Episodes of throat irritation and general malaise observed. No remarkable family history or chronic illness reported. Nutritional intake and sleep patterns appear adequate. Vital measurements include a body temperature of 98.0°F and an oxygen saturation level of 97%. No definitive pattern observed; further evaluation is warranted.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-1365.png
-VIRAL PNEUMONIA-6,high,medium,"Patient TEST-DY43, a 75 years old individual presented after experiencing symptoms for approximately 5 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 100.7°F and an oxygen saturation level of 95%. Nutritional intake and sleep patterns appear adequate. No remarkable family history or chronic illness reported. Diagnosis remains unclear pending further laboratory confirmation.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-927.png
+VIRAL PNEUMONIA-6,medium,medium,"Patient TEST-DY43, a 75 years old individual presented after experiencing symptoms for approximately 5 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 100.7°F and an oxygen saturation level of 95%. Nutritional intake and sleep patterns appear adequate. No remarkable family history or chronic illness reported. Diagnosis remains unclear pending further laboratory confirmation.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-927.png
 COVID-7,high,high,"Patient TEST-DN15, a 37 years old individual presented after experiencing symptoms for approximately 10 days. The patient has noted intermittent chest pressure and occasional shortness of breath. Vital measurements include a body temperature of 99.1°F and an oxygen saturation level of 91%. Preliminary indicators fall into a diagnostic grey area. No remarkable family history or chronic illness reported. Anosmia has been intermittently observed over recent days.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1085.png
 NORMAL-7,low,low,"Patient TEST-QU92, a 85 years old individual presented after experiencing symptoms for approximately 3 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 98.2°F and an oxygen saturation level of 97%. Nutritional intake and sleep patterns appear adequate. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-7874.png
 COVID-6,high,high,"Patient TEST-YM73, a 65 years old individual presented after experiencing symptoms for approximately 2 days. Episodes of throat irritation and general malaise observed. Nutritional intake and sleep patterns appear adequate. No remarkable family history or chronic illness reported. Vital measurements include a body temperature of 100.0°F and an oxygen saturation level of 93%. Diagnosis remains unclear pending further laboratory confirmation. Anosmia has been intermittently observed over recent days.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1399.png
@@ -22,10 +22,10 @@ COVID-1,high,high,"Patient TEST-FB14, a 40 years old individual presented after
 COVID-2,high,high,"Patient TEST-HB66, a 73 years old individual presented after experiencing symptoms for approximately 10 days. Mild respiratory symptoms have progressed over several days. Nutritional intake and sleep patterns appear adequate. Vital measurements include a body temperature of 99.3°F and an oxygen saturation level of 89%. Diagnosis remains unclear pending further laboratory confirmation.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1410.png
 NORMAL-3,low,low,"Patient TEST-KX40, a 39 years old individual presented after experiencing symptoms for approximately 2 days. Reported complaints include mild fatigue and sporadic episodes of wheezing. No prior admissions or surgical history disclosed. No prior admissions or surgical history disclosed. Vital measurements include a body temperature of 97.6°F and an oxygen saturation level of 95%. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-5988.png
 COVID-9,high,high,"Patient TEST-JK08, a 64 years old individual presented after experiencing symptoms for approximately 7 days. Nutritional intake and sleep patterns appear adequate. Episodes of throat irritation and general malaise observed. Vital measurements include a body temperature of 100.0°F and an oxygen saturation level of 93%. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-2796.png
-VIRAL PNEUMONIA-3,high,medium,"Patient TEST-RZ58, a 84 years old individual presented after experiencing symptoms for approximately 4 days. Reported complaints include mild fatigue and sporadic episodes of wheezing. Vital measurements include a body temperature of 100.3°F and an oxygen saturation level of 91%. No remarkable family history or chronic illness reported. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-843.png
+VIRAL PNEUMONIA-3,medium,medium,"Patient TEST-RZ58, a 84 years old individual presented after experiencing symptoms for approximately 4 days. Reported complaints include mild fatigue and sporadic episodes of wheezing. Vital measurements include a body temperature of 100.3°F and an oxygen saturation level of 91%. No remarkable family history or chronic illness reported. Preliminary indicators fall into a diagnostic grey area.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-843.png
 NORMAL-9,low,low,"Patient TEST-SG97, a 24 years old individual presented after experiencing symptoms for approximately 10 days. Standard precautions have been advised post-evaluation. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 98.7°F and an oxygen saturation level of 100%. Presentation overlaps multiple pulmonary conditions.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-4888.png
 VIRAL PNEUMONIA-2,medium,medium,"Patient TEST-OG12, a 74 years old individual presented after experiencing symptoms for approximately 3 days. Mild respiratory symptoms have progressed over several days. Vital measurements include a body temperature of 101.3°F and an oxygen saturation level of 91%. Presentation overlaps multiple pulmonary conditions. No prior admissions or surgical history disclosed.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-396.png
 COVID-4,low,high,"Patient TEST-KY96, a 83 years old individual presented after experiencing symptoms for approximately 6 days. Patient remains oriented with stable hemodynamics. Reported complaints include mild fatigue and sporadic episodes of wheezing. Vital measurements include a body temperature of 99.9°F and an oxygen saturation level of 94%. Presentation overlaps multiple pulmonary conditions. Nutritional intake and sleep patterns appear adequate.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1639.png
-VIRAL PNEUMONIA-7,high,medium,"Patient TEST-ZK84, a 52 years old individual presented after experiencing symptoms for approximately 1 days. Patient remains oriented with stable hemodynamics. Episodes of throat irritation and general malaise observed. No remarkable family history or chronic illness reported. Vital measurements include a body temperature of 99.7°F and an oxygen saturation level of 91%. Clinical features are suggestive of a nonspecific viral etiology.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-397.png
+VIRAL PNEUMONIA-7,medium,medium,"Patient TEST-ZK84, a 52 years old individual presented after experiencing symptoms for approximately 1 days. Patient remains oriented with stable hemodynamics. Episodes of throat irritation and general malaise observed. No remarkable family history or chronic illness reported. Vital measurements include a body temperature of 99.7°F and an oxygen saturation level of 91%. Clinical features are suggestive of a nonspecific viral etiology.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-397.png
 NORMAL-10,low,low,"Patient TEST-PW53, a 51 years old individual presented after experiencing symptoms for approximately 9 days. Standard precautions have been advised post-evaluation. The patient has noted intermittent chest pressure and occasional shortness of breath. Vital measurements include a body temperature of 97.6°F and an oxygen saturation level of 97%. Diagnosis remains unclear pending further laboratory confirmation. No prior admissions or surgical history disclosed.",/Users/preetham_ravula/projects/medi-llm/data/images/NORMAL/Normal-1943.png
 VIRAL PNEUMONIA-4,medium,medium,"Patient TEST-PP31, a 38 years old individual presented after experiencing symptoms for approximately 3 days. Episodes of throat irritation and general malaise observed. Vital measurements include a body temperature of 102.1°F and an oxygen saturation level of 91%. Presentation overlaps multiple pulmonary conditions. Patient remains oriented with stable hemodynamics. Radiographic evidence reveals dispersed infiltrative patterns.",/Users/preetham_ravula/projects/medi-llm/data/images/VIRAL PNEUMONIA/Viral Pneumonia-411.png

predictions_multimodal_20250726_174234.csv

@@ -0,0 +1,2 @@
+patient_id,predicted,truth_label,emr_text,image_path
+COVID-4,low,high,"Patient TEST-KY96, a 83 years old individual presented after experiencing symptoms for approximately 6 days. Patient remains oriented with stable hemodynamics. Reported complaints include mild fatigue and sporadic episodes of wheezing. Vital measurements include a body temperature of 99.9°F and an oxygen saturation level of 94%. Presentation overlaps multiple pulmonary conditions. Nutritional intake and sleep patterns appear adequate.",/Users/preetham_ravula/projects/medi-llm/data/images/COVID/COVID-1639.png